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ECOL
453R/553R
Computing Concepts for Bioinformatics Fall 2003 |
| Class Notes (HTML/Powerpoint) This is for ECOL 453/553R ONLY!!! | ||
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Part I: Introduction to Bioinformatics Part II: Introduction to UNIX & PERL Part III: Introduction to commandline, EMBOSS Part IV: Your first perl program Part V: Your second perl program Part VI: Your first Bioperl program Part VII:
NCBI BLAST
Part VIII:
Comamnd line Interactions, GetOpt and SeqIO
Part IX:
EMBOSS and Clustal
Part X:
Database concepts and MySQL
Part XI:
More MySQL and Perl DBI/DBD
Part XII:
Introduction to R and more Perl+MySQL
Part XIII:
Perl Patterns & Subroutines, Sequence Features and BioPerl SearchIO
Part XIV:
Access, Excel, PHP and MySQL !!!
Final Project: |
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